BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D04SP1|AL428536
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1400 1585 0.0
>3x_Contig1400
Length = 8536
Score = 1585 bits (795), Expect = 0.0
Identities = 806/815 (98%)
Strand = Plus / Plus
Query: 1 gatcttcatcaaaaagttcttcgctttctggaaactgctgcctgatttcttcaagccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5512 gatcttcatcaaaaagttcttcgctttctggaaactgctgcctgatttcttcaagccttt 5571
Query: 61 ttcaccagaacatgcgatataggaatcatgttttgattgtagtacttcgttagtattact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5572 ttcaccagaacatgcgatataggaatcatgttttgattgtagtacttcgttagtattact 5631
Query: 121 attcccactgtcgaccgccgcatgggcttttgatacaattgattcagttctattgacgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5632 attcccactgtcgaccgccgcatgggcttttgatacaattgattcagttctattgacgtt 5691
Query: 181 gtcgccaaagtttcgactggaagagttgtccgagatttcaggatttaatattggtgatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5692 gtcgccaaagtttcgactggaagagttgtccgagatttcaggatttaatattggtgatag 5751
Query: 241 atccacgggaatattttgtatcaaggcggtggatggcctgagatttatgtcatcattcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5752 atccacgggaatattttgtatcaaggcggtggatggcctgagatttatgtcatcattcaa 5811
Query: 301 agaatcttgctggttgcttttcgtttccgaggaatccactaggtcgtattcctttwccgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5812 agaatcttgctggttgcttttcgtttccgaggaatccactaggtcgtattccttttccgt 5871
Query: 361 ttttncctcctcgatctgcaacacttgtcttgcgggttcacttaacgttaatatattcaa 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5872 tttttcctcctcgatctgcaacacttgtcttgcgggttcacttaacgttaatatattcaa 5931
Query: 421 tttcaccaatgaatcagaatcatattgctcatcgctatgtgaatganccttattcccgct 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5932 tttcaccaatgaatcagaatcatattgctcatcgctatgtgaatgatccttattcccgct 5991
Query: 481 gtaggtttgttgatcttcttcttcctcgttaaagctaggaagagccttgtcttthtcaaa 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5992 gtaggtttgttgatcttcttcttcctcgttaaagctaggaagagccttgtctttttcaaa 6051
Query: 541 gtcctcattatcattcgacaaagtggcatgtagttggtatttcaccggtgatcttggcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6052 gtcctcattatcattcgacaaagtggcatgtagttggtatttcaccggtgatcttggcag 6111
Query: 601 tgatggtatctrattttvttcatcgaatgatgcgttcgagggagttgtcggagaactttg 660
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6112 tgatggtatctgattttgttcatcgaatgatgcgttcgagggagttgtcggagaactttg 6171
Query: 661 ttcagaaaccctaccagaaatgacgctattcacactggcatatgamgaggatgagcccga 720
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6172 ttcagaaaccctaccagaaatgacgctattcacactggcatatgaagaggatgagcccga 6231
Query: 721 tgccgccttattcaccagctgctgtggttgtvgcggaggggctaatgagcttgttgcttg 780
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6232 tgccgccttattcaccagctgctgtggttgtggcggaggggctaatgagcttgttgcttg 6291
Query: 781 tctttmattgaatacattatcctgcgatacatttt 815
||||| |||||||||||||||||||||||||||||
Sbjct: 6292 tctttcattgaatacattatcctgcgatacatttt 6326
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6021
Number of Sequences: 1807
Number of extensions: 6021
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)